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Department of Environmental Science

Publications

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Albers, C. N., Ellegaard-Jensen, L., Harder, C. B., Rosendahl, S., Knudsen, B. E., Ekelund, F. & Aamand, J. (2015). Groundwater chemistry determines the prokaryotic community structure of waterworks sand filters. Environmental Science & Technology, 49, 839-846. https://doi.org/10.1021/es5046452

Albers, C. N., Ellegaard-Jensen, L., Hansen, L. H. & Sørensen, S. R. (2018). Bioaugmentation of rapid sand filters by microbiome priming with a nitrifying consortium will optimize production of drinking water from groundwater. Water Research, 129, 1-10. https://doi.org/10.1016/j.watres.2017.11.009

Eckholdt, A., Winding, A. & Krogh, P. H. (2017, Nov 15). Dine marker har DNA. FBG Medier A/S.

Ellegaard-Jensen, L., Knudsen, B. E., Johansen, A., Albers, C. N., Aamand, J. & Rosendahl, S. (2014). Fungal-bacterial consortia increase diuron degradation in water-unsaturated systems. Science of the Total Environment, 466-467, 699-705. https://doi.org/10.1016/j.scitotenv.2013.07.095

Frková, Z., Johansen, A., de Jonge, L. W., Olsen, P., Gosewinkel, U. & Bester, K. (2016). Degradation and enantiomeric fractionation of mecoprop in soil previously exposed to phenoxy acid herbicides - New insights for bioremediation. Science of the Total Environment, 569-570, 1457-1465. https://doi.org/10.1016/j.scitotenv.2016.06.236

Gobbi, A., Santini, R. G., Filippi, E., Ellegaard-Jensen, L., Jacobsen, C. S. & Hansen, L. H. (2019). Quantitative and qualitative evaluation of the impact of the G2 enhancer, bead sizes and lysing tubes on the bacterial community composition during DNA extraction from recalcitrant soil core samples based on community sequencing and qPCR. PLoS One, 14(4), Article e0200979. https://doi.org/10.1371/journal.pone.0200979

Hylling, O., Fini, M. N., Muff, J., Madsen, H. T., Aamand, J., Hansen, L. H. & Ellegaard-Jensen, L. (2017). MEM2BIO - Membrane residual water as a feed for bioaugmented waterworks sand filters. Poster session presented at the second international congress on microbial resource management (MRM2), Ghent, Belgium.

Hylling, O., Fini, M. N., Muff, J., Madsen, H. T., Aamand, J., Hansen, L. H. & Ellegaard-Jensen, L. (2017). Aminobacter sp. biodegradation of 2,6-dichlorobenzamide (BAM) is stimulated in membrane treated residual water. Poster session presented at Danish Microbiological Society (DMS) congress 2017, Copenhagen, Denmark.

Imparato, V., Santos, S., Hansen, V., Johansen, A., Giagnoni, L., Renella, G., Nielsen, H. H. & Winding, A. (2014). How do soil biota react to gasification biochar?. Poster session presented at ISME Symposium , Seoul, Korea, Republic of.

Imparato, V., Santos, S., Johansen, A., Geisen, S. & Winding, A. (2016). Stimulation of bacteria and protists in rhizosphere of glyphosate-treated barley. Applied Soil Ecology, 98, 47-55. https://doi.org/10.1016/j.apsoil.2015.09.007

Imparato, V., Hansen, V., Santos, S., Nielsen, T. K., Giagnoni, L., Hauggaard-Nielsen, H., Johansen, A., Renella, G. & Winding, A. (2016). Gasification biochar has limited effects on functional and structural diversity of soil microbial communities in a temperate agroecosystem. Soil Biology & Biochemistry, 99, 128-136. https://doi.org/10.1016/j.soilbio.2016.05.004

Jacquiod, S. J. A., Stenbæk, J., Santos, S., Winding, A., Sørensen, S. J. & Priemé, A. (2016). Metagenomes provide valuable comparative information on soil microeukaryotes. Research in Microbiology, 167(5), 436-450. Article 167. https://doi.org/10.1016/j.resmic.2016.03.003

Jakszyn, P., Luján-Barroso, L., Agudo, A., Bueno-de-Mesquita, H. B., Molina, E., Sánchez, M. J., Fonseca-Nunes, A., Siersema, P. D., Matiello, A., Tumino, R., Saieva, C., Pala, V., Vineis, P., Boutron-Ruault, M.-C., Racine, A., Bastide, N., Travis, R. C., Khaw, K.-T., Riboli, E. ... González, C. A. (2013). Meat and heme iron intake and esophageal adenocarcinoma the European Prospective investigation into Cancer and Nutrition study. International Journal of Cancer, 133(11), 2744-50. https://doi.org/10.1002/ijc.28291

Nunes, I., Jacquiod, S., Brejnrod, A., Holm, P. E., Johansen, A., Brandt, K. K., Prieme, A. & Sorensen, S. J. (2016). Coping with copper: legacy effect of copper on potential activity of soil bacteria following a century of exposure. FEMS Microbiology Ecology, 92(11), Article fiw175. https://doi.org/10.1093/femsec/fiw175

Santos, S. S., Nielsen, T. K., Hansen, L. H. & Winding, A. (2015). Comparison of three DNA extraction methods for recovery of soil protist DNA. Journal of Microbiological Methods, 115, 13-19. https://doi.org/10.1016/j.mimet.2015.05.011

Santos, S. S., Hendriksen, N. B., Jakobsen, H. H. & Winding, A. (2017). Effects of Bacillus cereus Endospores on Free-Living Protist Growth. Microbial Ecology, 73(3), 699-709. https://doi.org/10.1007/s00248-016-0905-7

Santos, S. S., Nunes, I., Nielsen, T. K., Jacquiod, S., Hansen, L. H. & Winding, A. (2017). Soil DNA Extraction Procedure Influences Protist 18S rRNA Gene Community Profiling Outcome. Protist, 168(3), 283-293. https://doi.org/10.1016/j.protis.2017.03.002

Santos, S., Schöler, A., Nielsen, T. K., Hansen, L. H., Schloter, M. & Winding, A. (2020). Land use as a driver for protist community structure in soils under agricultural use across Europe. Science of the Total Environment, 717, Article 137228. https://doi.org/10.1016/j.scitotenv.2020.137228

Sapkota, R., Santos, S., Farias, P. D. G., Krogh, P. H. & Winding, A. (2020). Insights into the earthworm gut multi-kingdom microbial communities. Science of the Total Environment, 727, Article 138301. https://doi.org/10.1016/j.scitotenv.2020.138301

Stæhr, P. A., Santos, S., Hansen, L. H., Lundsteen, S., Haraguchi, L., Dahl, K., Ávila, M. & Winding, A. (2017). Comparison of eDNA and conventional techniques for monitoring species diversity of boulder reefs in Danish waters. Poster session presented at DNAqua-Net Kick-off, Essen, Germany. http://dnaqua.net/wp-content/uploads/2017/03/Poster_Winding.pdf

Wang, Y., Qin, Y., Kot, W., Zhang, F., Zheng, S., Wang, G., Hansen, L. H. & Rensing, C. (2016). Genome Sequence of Selenium-Solubilizing Bacterium Caulobacter vibrioides T5M6. Genome Announcements, 4(1), Article e01721-15. https://doi.org/10.1128/genomeA.01721-15

Winding, A., Santos, S., Browne, P. D., Hansen, L. H., Johansen, A. & Krogh, P. H. (2016). Metagenomics of bacteria, fungi and protists affected by biochar and earthworms in soil. Poster session presented at Danmarks Mikrobiologiske Selskab, København, Denmark.

Winding, A., Bang-Andreasen, T., Hansen, L. H., Panitz, F., Krogh, P. H., Krause-Jensen, D., Stæhr, P., Nicolaisen, M., Hendriksen, N. B., Sapkota, R., Santos, S. & Andersen, L. W. (2019). eDNA in environmental monitoring. Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk rapport fra DCE - Nationalt Center for Miljø og Energi No. 133 https://dce2.au.dk/pub/TR133.pdf

Revised 21.03.2025

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Anne Winding