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List of publications for Department of Environmental Science

The list displays all publications which have a staff member at Department of Environmental Science as co-author. The list includes the period before the department was established in 2011 - i.e. when staff members were employed at the former Danish National Environmental Research Institute.

By default the list is grouped according to year of publication, and sorted by author within years. The sorting may be changed to a certain extent.


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Jacobsen, C. S., Brinch, U., Jørgensen, C., Aamand, J. & Jensen, B. (1994). Growth in soil of Tn5-lux modified phenanthrene degrading Pseudomonas sp. Poster session presented at New Approaches in Microbial Ecology (NAME), Elsinore, Denmark.
Jacobsen, C. S. (1996). Detection and quantification of microbial DNA sequences in soil by southern- and dot/slot blot hybridization. In Molecular Microbial Ecology Manual (1st Ed ed., pp. 2.4.2:1-11). Kluwer Academic Publishers (Springer).
Jacobsen, C. S. & Pedersen, J. C. (1992). Growth, activity and genetic stability of 2,4-D degrading bacteria in natural soils. In Soil Decontamination Using Biological Processes (pp. 83-90)
Jacobsen, C. S., Bech, T. B., Amin, M., Garcia, R., Bælum, J., Fredslund, L., Kjaer, J., Forslund, A., Popovic, O., Bui, T. X., Bang, D. D., Lægdsmand, M., Jensen, L. S., Santorum, P. & Dalsgaard, A. (2009). Leaching of pathogens from manure to drainage water – assayed using classic and DNA/mRNA based methods. Poster session presented at BioMicroWorld, Lisabon, Portugal.
Jacobsen, C. S., Feld, L., Hjelmsø, M. H., Nielsen, M. S., Rønn, R., Ekelund, F., Johnsen, A., Sørensen, J. G. & Krogh, P. H. (2016). GENEPEASE Genomic tools for assessment of pesticide effects on the agricultural soil ecosystem. (pp. 1-53). Bekæmpelsesmiddelforskning fra Miljøstyrelsen.
Jacobsen, C. S., Nielsen, T. K., Vester, J. K., Stougaard, P., Nielsen, J. L., Voriskova, J., Winding, A., Baldrian, P., Liu, B., Frostegard, A., Pedersen, D., Tveit, A. T., Svenning, M. M., Tebbe, C. C., Ovreas, L., Jakobsen, P. B., Blazewicz, S. J., Hubablek, V., Bertilsson, S. ... Baelum, J. (2018). Inter-laboratory testing of the effect of DNA blocking reagent G2 on DNA extraction from low-biomass clay samples. Scientific Reports, 8(1), Article 5711. https://doi.org/10.1038/s41598-018-24082-y
Jacobsen, C. S., Bælum, J. & Broholm, M. (2010). Mikrobiel dechlorering af TCE - molekylære teknikker til bestemmelse af tilstedeværelse og aktivitet af specifikke nedbrydere. In Naturlig og stimuleret biologisk nedbrydning (pp. 31-38). ATV Jord og Grundvand.
Jacobsen, C. S., de Lipthay, J. R., Bender, M., Fredslund, L., Johnsen, A. R. & Johnsen, K. (2004). Direct analysis of microbial populations in soil and freshwater aquifers using nucleic acid based techniques. In Geological Survey of Denmark and Greenland Bulletin 4 (pp. 33-36). GEUS. http://www.eng.geus.dk/media/12498/nr4_p33-36.pdf
Jacquez, G., Sabel, C. E. & Shi, C. (2015). Genetic GIScience: Towards a place-based synthesis of the genome, exposome and behavome. Annals of the Association of American Geographers, 105(3), 454-472.
Jacquiod, S. J. A., Stenbæk, J., Santos, S., Winding, A., Sørensen, S. J. & Priemé, A. (2016). Metagenomes provide valuable comparative information on soil microeukaryotes. Research in Microbiology, 167(5), 436-450. Article 167. https://doi.org/10.1016/j.resmic.2016.03.003
Jacquiod, S., Nunes, I., Brejnrod, A., Hansen, M. A., Holm, P. E., Johansen, A., Brandt, K. K., Priemé, A. & Sørensen, S. J. (2018). Long-term soil metal exposure impaired temporal variation in microbial metatranscriptomes and enriched active phages. Microbiome, 6(1), Article 223. https://doi.org/10.1186/s40168-018-0606-1
Jahnke, A., Mayer, P. & McLachlan, M. S. (2012). Sensitive Equilibrium Sampling To Study Polychlorinated Biphenyl Disposition in Baltic Sea Sediment. Environmental Science & Technology, 46(18), 10114−10122. https://doi.org/10.1021/es302330v
Jahnke, A., Mayer, P., McLachlan, M. S., Wickström, H., Gilbert, D. & Macleod, M. (2014). Silicone passive equilibrium samplers as 'chemometers' in eels and sediments of a Swedish lake. Environmental Science: Processes & Impacts, 16, 464-472. https://doi.org/10.1039/c3em00589e
Jakobsen, M. & Nielsen, H. Ø. (2014). Forvaltningens samspil med borgere og virksomheder. In J. Blom-Hansen, P. M. Christiansen, T. Pallesen & S. Serritzlew (Eds.), Offentlig forvaltning : et politologisk perspektiv (pp. 325-351). Hans Reitzels Forlag.
Jakobsen, L., Hansen, L. H., Sandvang, D., Sørensen, S. J., Frimodt-Møller, N. & Hammerum, A. M. (2005). Effect of Antibiotics in Sub-Lethal Levels on Conjugation Frequency between Escherichia coli Strains. Poster session presented at First Conference on New Frontiers in Microbiology and Infection, Villars-sur-Ollons, Switzerland.
Jakobsen, T. H., Hansen, A., Kerpedjiev, P., Hansen, M., Hansen, L. H., Jensen, P. O., Hansen, C. R., Qvortrup, K., Givskov, M., Burmølle, M., Sørensen, S. J., Hoiby, N. & Bjarnsholt, T. (2010). Complete genome sequence of the CF pathogen Achromobacter Xylocoxidans and in vitro biofilm formation. Poster session presented at The 24th Annual North American Cystic Fibrose Conference, Baltimore, United States.
Jakobsen, R. R., Haahr, T., Humaidan, P., Jensen, J. S., Kot, W. P., Castro-Mejia, J. L., Deng, L., Leser, T. D. & Nielsen, D. S. (2020). Characterization of the vaginal DNA virome in health and dysbiosis. Viruses, 12(10), Article 1143. https://doi.org/10.3390/v12101143
Jakobsen, M. & Nielsen, H. O. (2024). Forvaltningens samspil med borgere og virksomheder. In Offentlig forvaltning: et politologisk perspektiv (3 ed., pp. 373-402). Hans Reitzels Forlag.
Jänsch, S., Scheffczyk, A., Römbke, J., Rojo, V., Vierna, J., Vizcaíno, A., Natal da Luz, T., Alves, D., Martins, P., Mendes, S., Scopel, L., Sousa, J. P., Krogh, P. H., Sapkota, R., Schmelz, R. M. & Glante, F. (Ed.) (2023). Bewertung der biologischen Vielfalt mittels DNA-Extraktion aus Bodenproben von BDF: Abschlussbericht. Umweltbundesamt. Umweltbundesamt. Texte No. 142 https://www.umweltbundesamt.de/sites/default/files/medien/11850/publikationen/142_2023_texte_bewertung_der_biologischen_vielfalt.pdf
Jänsch, S., Alves, D., Cunha, L., Krogh, P. H., Natal-da-Luz, T., Rojo, V., Römbke, J., Sapkota, R., Scheffczyk, A., Schmelz, R. M., Scopel, L., Sousa, J. P., Vierna, J. & Vizcaíno, A. (2025). Comparison of Morphological and DNA-Based Identification Methods to Assess Earthworm (Clitellata: Lumbricidae) Diversity at 25 Permanent Soil Monitoring Sites in Germany. Ecology and Evolution, 15(4), Article e71155. https://doi.org/10.1002/ece3.71155
Jansson, T., Bakker, M., Hasler, B., Helming, K., Kaae, B., Lemouel, P., Neye, S., Ortiz, R., Sick Nielsen, T., Verhoog, D. & Verkerk, H. (2009). The SIAT model chain: Baseline scenario storylines. European Commission. http://www.zalf.de/home_ip-sensor/products/SENSOR_rep_2009_2_SIATModelChain.pdf
Janzen, T., Muhammed, M. K., Kot, W., Hansen, L. H., S. Nielsen, D., Sørensen, S. & Vogensen, F. K. (2014). Diversity and evolution of bacteriophages in wheys derived from an undefined mixed DL-starter culture..
Janzen, N., Hesse, J., Tuerk, J. & Bester, K. (2011). Removal of fragrance compounds from waste water by ozonation and identification of oxidation by-product. Poster session presented at SETAC Europe , Milano, Italy.
Janzen, N., Richard, J., Tavian, M., Wolff, M., Dopp, E., Türk, J. & Bester, K. (2010). Ozonation of polycyclic musks HHCB and AHTN and identification of oxidation products. Poster session presented at Jahrestagung der Wasserchemischen Gesellschaft in der GdCh, Bayreuth, Germany.
Janzen, N., Banzhaf, S., Scheytt, T. & Bester, K. (2010). Activated vertical soil filter for the elimination of micro pollutants from storm and waste water. Poster session presented at Jahrestagung der Wasserchemischen Gesellschaft in der GdCh, Bayreuth, Germany.
Jaques, A., Konstantinaviciute, I., Gasperic, M., Mylona, S., Quadrelli, R., Bacong, M., Gaudioso, D., Hallsdottir, B., Gyldenkærne, S. & Trusca, V. (2006). Report of the individual review of the greenhouse gas inventory of Switzerland submitted in 2005. United Nations - Framework Convention on Climate Change.
Jaques, A., Konstantinaviciute, I., Gasperic, M., Mylona, S., Quadrelli, R., Bacong, M., Gaudioso, D., Hallsdottir, B., Gyldenkærne, S., Trusca, V., Alvarado, A. N., Ravindranath, N. H., Calvo, E. & Towprayoon, S. (2006). Report of the individual review of the greenhouse gas inventory of Slovakia submitted in 2005. United Nations - Framework Convention on Climate Change.